I don't see why it matters if certain champions are more viable on one map/mode compared to another, as long as they're not ultra trash never pick or something. I guess some people who really love champion X would QQ a lot of X was less viable in a different mode, but that's pretty silly.
If LoL continues to expand in terms of maps and game modes, I can foresee balancing becoming both more difficult and simpler, because at a point it doesn't matter if every champion is viable on every map. For example, if you have 100 champions and fifty are viable on each map, that's pretty **** good.